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项目描述

Py_ContigViewer is a contig viewer, a stand alone
cross-platform desktop application that uses CAP3
alignments to graphically display and validate
candidate SNPs and InDels. It also simplifies PCR
oligo design in an interactive mode. The extended
mode provides the display of BLAST hits of
annotated sequences with intron positions for the
selected contig. Py_ContigViewer works in
conjunction with DIS (Deletion, Insertion,
Substitution) SNP discovery pipeline at
http://www.atgc.org/SNP_Discovery/.

系统要求

System requirement is not defined
Information regarding Project Releases and Project Resources. Note that the information here is a quote from Freecode.com page, and the downloads themselves may not be hosted on OSDN.

2004-04-20 05:23
Apr_19_2004

此版本提供透明的数据通过网络传输的套接字的perlprimer程序。它简化了寡核苷酸的设计,因为不再需要运行“保存为”/“开放的”对话。它还允许显示参数配置使用配置文件。
标签: Minor feature enhancements
This release provides transparent data transfer to the PerlPrimer program via a network socket. It simplifies oligo design because there is no longer a need to run "save as" / "open as" dialogs. It also allows configuration of display parameters using a config file.

2004-03-26 05:50
Mar_25_2004

此版本生成大约为寡聚设计,可以使用该程序直接选定的perlprimer地区信息FASTA格式输出文件。对于字符串搜索功能得到改善,并为一致序列的GC%含量显示实施。
标签: Minor feature enhancements
This version generates output files in FASTA format with
information about selected regions for oligo design that
can be used directly by the PerlPrimer program. The
search function for substrings was improved, and
displaying of GC% content for consensus sequences was
implemented.

2004-03-16 20:25
Mar_12_2004

标签: Initial freshmeat announcement

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